rs32716743 SNP Detail

Summary

• ID
  rs32716743
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134655881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTGTGACT AGCAGCTGCC
  TCTTAAGTAC AAATAGTAGG CTGGGGATGT AGCTCAATTG GTTAGAATGC TTCCTGAGTT
  TCTGTGAACC CAGCATCAGT AACAGTATTT TAGCCCTTCT GGAGGCAGCC CAGGGGCCAC
  ATACACAAAG GCAAATTTGC TTTTCTTTTT TTCTTTTTGG GTTTTACTGT GCTTTGAGTA
  M
  GGATATACAT AGCCATGGCT GTCCTGGAAC TCATTGTAGA TCAGGCTGGT CCTGAACTGG
  CCTTGAGATC CTCCTGCCTC GACTGTCCTT GTGCTGTTAG TAAAGGTATG AGCCACTGTG
  TCTGGTTAAG ACCACCCAAA GAGTATAGGT GGCAAGAATG CCCCTATCTA TCATTAGCAT
  GCAATTGGAC TCAGCATCCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45685168	mCV24216194	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A	A
ss147538910	ENSMUSSNP59225	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32716743					SNP	C	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134655881 () rs orientation: forward

Symbol	Name	Function Class
Rr367744	regulatory region 367744	1464 bp upstream
Rsrp1	arginine/serine rich protein 1	1200 bp downstream
Tssr39593	transcription start site region 39593	1967 bp downstream
Tssr39594	transcription start site region 39594	1880 bp downstream
Tssr39595	transcription start site region 39595	1840 bp downstream
Tssr43947	transcription start site region 43947	1199 bp upstream