rs32719097 SNP Detail

Summary

• ID
  rs32719097
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:9529500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTCTAGAC ACTAGAAATA
  CAGTTTTGGT GAATACACAA ACCTCTCGTT TCTGGCCATT AATTTATCAT GGGTATCTAG
  GGTTTTAGAA CTCCATAAAC AGTCAAAACA ACAATGGCTT GATTTTTCAG TCTAATACAG
  TTTTGGAAGC GATCATCCAA AAAGCTCCAA CAAAGAACTG ATATGAGGTT TCTTTTTTGA
  R
  ATTACCAGCA TACATCCACA TTTATGAGCC AGAATTTGAA TGAAACTCAA TGCTTCTTGA
  CAGTTCTTGA GAGTTACAAG CCATTTGCAG TATTGTCATC ATTCCCTCTG TCCTGGTGAT
  TAATACCCAC AAAACAACCT AATTAGTGCT AAATTCTTGC TTGCCCTGTT AGAGAACTGT
  GTAACTTGAT CATATATGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49390555	NES12654060	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A	G	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32719097					SNP	A	A	G	A	A	A	G	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49390555	NES12654060	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:9529500 () rs orientation: forward

Symbol	Name	Function Class
Il7r	interleukin 7 receptor	within coordinates
Rr186	regulatory region 186	326 bp proximal
Rr499183	regulatory region 499183	651 bp distal
Rr499184	regulatory region 499184	404 bp proximal
Tssr130646	transcription start site region 130646	931 bp downstream
Tssr130647	transcription start site region 130647	911 bp downstream
Tssr130648	transcription start site region 130648	874 bp downstream
Tssr133701	transcription start site region 133701	1362 bp upstream
Tssr133702	transcription start site region 133702	1326 bp upstream
Tssr133703	transcription start site region 133703	283 bp downstream
Tssr133704	transcription start site region 133704	324 bp downstream
Tssr133705	transcription start site region 133705	399 bp downstream
Tssr133706	transcription start site region 133706	436 bp downstream
Tssr133707	transcription start site region 133707	454 bp downstream
Tssr133708	transcription start site region 133708	618 bp downstream
Tssr133709	transcription start site region 133709	720 bp downstream
Tssr133710	transcription start site region 133710	897 bp downstream