rs32719103 SNP Detail

Summary

• ID
  rs32719103
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:9528613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGGTTCTC GTGCTTCCTG
  CCAGCTATTT GCACACATTT AACATGAGAT AATGACTCTC CCTCACCAAG TGACTCATGC
  TCCGTCATGC TGAAGAGTGT GACTCCTCTG ATGATTCTCT TCATAAGAAC ATGCAAGGGT
  TTTCCATCCT TGCTGATTAC AAAGTAAAGT CACACAAATA TCTAAGCTTA GGATGCACAA
  Y
  TAAAGGCATT TGACTGAAGA GCTAAACTAC AGAGCTAGGC TGATGTGTAT TGATACTGTG
  CATAAAGAAA ATACAGATGT ATTTGATACA AGCTTATGCA ATGTAGCTTT AACTGGTCTG
  GAACAAAGAT GATTTTTCTG TCTCAGCCTC TTAGGCTTCA GGACTACAGG GATGTACTAC
  TGCACCCAGT TTAGGAATGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49390562	NES12654153	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32719103					SNP	C	C	T	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49390562	NES12654153	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:9528613 () rs orientation: forward

Symbol	Name	Function Class
Il7r	interleukin 7 receptor	within coordinates
Rr186	regulatory region 186	1213 bp proximal
Rr499183	regulatory region 499183	within coordinates
Rr499184	regulatory region 499184	1291 bp proximal
Tssr130645	transcription start site region 130645	1451 bp downstream
Tssr130646	transcription start site region 130646	44 bp downstream
Tssr130647	transcription start site region 130647	24 bp downstream
Tssr130648	transcription start site region 130648	within coordinates
Tssr133701	transcription start site region 133701	475 bp upstream
Tssr133702	transcription start site region 133702	439 bp upstream
Tssr133703	transcription start site region 133703	1170 bp downstream
Tssr133704	transcription start site region 133704	1211 bp downstream
Tssr133705	transcription start site region 133705	1286 bp downstream
Tssr133706	transcription start site region 133706	1323 bp downstream
Tssr133707	transcription start site region 133707	1341 bp downstream
Tssr133708	transcription start site region 133708	1505 bp downstream
Tssr133709	transcription start site region 133709	1607 bp downstream
Tssr133710	transcription start site region 133710	1784 bp downstream