rs32719345 SNP Detail

Summary

• ID
  rs32719345
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:47584116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGCAATGC TTGGCATGAG
  CTTTTTTTGT GACTTCTGTC ATATTTAAAC TCAATAAACT TAGACCATTC AGCAAAGATG
  GGGCTAACAT CCCTGTATCT TACTCATGTT CTCAGAAGTC GTGGTCCTAT GGTGAACACA
  ATGAGTGCTG TGTTTCCACT GATTAGGACT AATGCTTAGG ACTCGTGGCT TGTTAATGGC
  W
  GCTTGAAACT GCAGGATATA GTGTAATTAA GGGAGGGATT TGTTTCTGTG GTGAACGTTG
  TGTTTTGTTT TGTTTTGAAC ATTCTTACCC CTCCCTGCCT CTTTTGTAGG GCTAGACCAC
  ATCCAGGACA TTGCACAGGC TAGACCACAT CCAGTACATT GCACAGGCTA GACCACAAGA
  CCTCTGCCAT TGAGCTACTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47703319	NES11315518	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32719345					SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47703319	NES11315518	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:47584116 () rs orientation: forward

Symbol	Name	Function Class
Cadm1	cell adhesion molecule 1	within coordinates
Rr209331	regulatory region 209331	716 bp distal
Rr209332	regulatory region 209332	1486 bp proximal