rs32719855 SNP Detail

Summary

• ID
  rs32719855
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:9528148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGGAAGCT TTTATTCTTA
  CTGTGGTTTT GACATTATGT GGAACAATGG TCACAGTGTT CAATAGGAAG CATCTAAGCA
  TTAAGTAAAA ATTCTAGGTA TAGAAATTTA AAGCATTTGG AATACATATT CTAAGTAAGG
  CAGTGTCATT TAGAAGACAG TGATTACTTG ATGAAGAGCT TGAACTGTCA GGGCTTTTGC
  R
  GTTCCCTTTG CTTGATTTGA CTATCCTTTA GTTACTAGAA AATTGACTAG TAGATTGCTG
  CCAGCACAAA GTGGGAGGTA TCGTGACATG CCTATGTGAC GCATATGGGT GGTTATGATC
  ATCAATCTAA AAACATTTCA AAATTTAAAA AGGTGAAGTG AAAATCCTGT TTAACAGCAA
  GAATTTTTAC TTTTTTTTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49390567	NES12654144	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32719855					SNP	G	G	A	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49390567	NES12654144	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:9528148 () rs orientation: forward

Symbol	Name	Function Class
Il7r	interleukin 7 receptor	within coordinates
Rr186	regulatory region 186	1678 bp proximal
Rr499183	regulatory region 499183	3 bp proximal
Rr499184	regulatory region 499184	1756 bp proximal
Tssr130645	transcription start site region 130645	986 bp downstream
Tssr130646	transcription start site region 130646	410 bp upstream
Tssr130647	transcription start site region 130647	428 bp upstream
Tssr130648	transcription start site region 130648	465 bp upstream
Tssr133701	transcription start site region 133701	10 bp upstream
Tssr133702	transcription start site region 133702	16 bp downstream
Tssr133703	transcription start site region 133703	1635 bp downstream
Tssr133704	transcription start site region 133704	1676 bp downstream
Tssr133705	transcription start site region 133705	1751 bp downstream
Tssr133706	transcription start site region 133706	1788 bp downstream
Tssr133707	transcription start site region 133707	1806 bp downstream
Tssr133708	transcription start site region 133708	1970 bp downstream