rs32719856 SNP Detail

Summary

• ID
  rs32719856
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:9528030 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGAGAGCT CTCCCAGGAG
  TCTTGGAGAA ATCAGTATGA AAGGCAATAT GTGAATTATA ATTATGCAAA TATACATGCA
  GCATTTGGAG TTTTTTTGAA AAAAAATTGT AGTATATCAA TGGAAGCTTT TATTCTTACT
  GTGGTTTTGA CATTATGTGG AACAATGGTC ACAGTGTTCA ATAGGAAGCA TCTAAGCATT
  R
  AGTAAAAATT CTAGGTATAG AAATTTAAAG CATTTGGAAT ACATATTCTA AGTAAGGCAG
  TGTCATTTAG AAGACAGTGA TTACTTGATG AAGAGCTTGA ACTGTCAGGG CTTTTGCGGT
  TCCCTTTGCT TGATTTGACT ATCCTTTAGT TACTAGAAAA TTGACTAGTA GATTGCTGCC
  AGCACAAAGT GGGAGGTATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49390568	NES12654143	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32719856					SNP	A	A	G	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49390568	NES12654143	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:9528030 () rs orientation: forward

Symbol	Name	Function Class
Il7r	interleukin 7 receptor	within coordinates
Rr186	regulatory region 186	1796 bp proximal
Rr499183	regulatory region 499183	121 bp proximal
Rr499184	regulatory region 499184	1874 bp proximal
Tssr130645	transcription start site region 130645	868 bp downstream
Tssr130646	transcription start site region 130646	528 bp upstream
Tssr130647	transcription start site region 130647	546 bp upstream
Tssr130648	transcription start site region 130648	583 bp upstream
Tssr133701	transcription start site region 133701	99 bp downstream
Tssr133702	transcription start site region 133702	134 bp downstream
Tssr133703	transcription start site region 133703	1753 bp downstream
Tssr133704	transcription start site region 133704	1794 bp downstream
Tssr133705	transcription start site region 133705	1869 bp downstream
Tssr133706	transcription start site region 133706	1906 bp downstream
Tssr133707	transcription start site region 133707	1924 bp downstream