GCTTT CCAGCACTTA CTTTTCAAAG R GGCTGGCCCC TGATCTCAGC CCCCT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|---|
ss45184642 | mCV24367543 | ABI | CRAMUS_MOUSE | f | SNP | G | G | A | G |
ss144881140 | ENSMUSSNP6496137 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
C57BL/6J |
DBA/2J |
||||
rs32720258 | SNP | G | G | A | G |
Location: Chr1:87210003 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Efhd1 | EF hand domain containing 1 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr414772 | regulatory region 414772 | within coordinates | ||||||
Rr414773 | regulatory region 414773 | 250 bp distal | ||||||
Rr414774 | regulatory region 414774 | 82 bp distal | ||||||
Tssr7837 | transcription start site region 7837 | 519 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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