rs32720511 SNP Detail

Summary

• ID
  rs32720511
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:133853503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAC CTAGGCTCCA GCCACTCTCC
  R
  TGGCTGCCTT CCAGAACTGC TGCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45685729	mCV24805095	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss147518496	ENSMUSSNP1111879	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss321345443	CHEV_4_133682107	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32720511					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:133853503 () rs orientation: forward

Symbol	Name	Function Class
Rr367739	regulatory region 367739	1747 bp downstream
Rr601571	regulatory region 601571	1454 bp distal
Rr601574	regulatory region 601574	1574 bp distal
Sh3bgrl3	SH3 domain binding glutamic acid-rich protein-like 3	1214 bp downstream
Tssr39534	transcription start site region 39534	1634 bp downstream
Tssr39535	transcription start site region 39535	1343 bp upstream
Tssr39536	transcription start site region 39536	1426 bp upstream
Tssr39537	transcription start site region 39537	1716 bp upstream
Tssr43866	transcription start site region 43866	1435 bp downstream
Tssr43867	transcription start site region 43867	1495 bp downstream
Tssr43868	transcription start site region 43868	1531 bp downstream
Tssr43869	transcription start site region 43869	1606 bp downstream
Tssr43870	transcription start site region 43870	1759 bp downstream
Tssr43871	transcription start site region 43871	1807 bp downstream
Tssr43872	transcription start site region 43872	1837 bp downstream
Tssr43873	transcription start site region 43873	1860 bp downstream
Tssr43874	transcription start site region 43874	1890 bp downstream
Ubxn11	UBX domain protein 11	within coordinates