rs32723314 SNP Detail

Summary

• ID
  rs32723314
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181339898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAATACAGAT AAGATCTCTT AGAGTTCATG AAAGGATGTG
  GAAGCTCTAA GAAGTAACAT CTTCGTCCAG GACTATAGGT AGTTGGATCT GTCGGGCCCC
  M
  TGACCCCTGA CCCCTGACCC CCGACCCCTT TGGCTCCCTT GGCAAGACTG TTATACTCTC
  CCAGAGAGTG ATTCCCTAAC TGCCCAAGGA TTCTTCCAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45185323	mCV25244187	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	A
ss146396656	ENSMUSSNP5538149	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		A
ss320161707	CHEV_1_183442464	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32723314					SNP	C	A	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181339898 () rs orientation: forward

Symbol	Name	Function Class
Ccdc121rt1	coiled-coil domain containing 121, retrogene 1	882 bp upstream
Cpgi1136	CpG island 1136	1469 bp distal
Rr424762	regulatory region 424762	739 bp distal
Rr424763	regulatory region 424763	828 bp distal
Rr424764	regulatory region 424764	108 bp proximal