rs32725275 SNP Detail

Summary

• ID
  rs32725275
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:17383798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAT GCTCTTGCCA CCAGGCCTTG
  Y
  CTCCGATGAT GAATGTGCAC ACACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss46183523	mCV22518734	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss148765726	ENSMUSSNP3161339	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss322521495	CHEV_8_17333782	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32725275					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:17383798 () rs orientation: forward

Symbol	Name	Function Class
Csmd1	CUB and Sushi multiple domains 1	within coordinates
Tssr80508	transcription start site region 80508	461 bp upstream