rs32729159 SNP Detail

Summary

• ID
  rs32729159
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:4841274 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGGATGAC TACACAGTCC TGTTACGTAT
  CCTTCAGCAG CCCTAACCCT GGCCTTAAAC AAAATCCCTT GACAACCCTT TTAAGTTCCT
  Ctgtgtgtct gtctgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
  R
  tgtATAGTTG CCAGCTTAGA AATATAAAAT CCATTATTTA AAATTAGTTT TCGGGCAGCT
  AGTAGAGGAC ACGGGCAAGA TGGCGGTGGT GGCTGGTCTG GTGCGGGGAC CCTTGCGGCA
  GGTTTCCAGG CGTTTTCACC GCTCGGCGCC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45186590	mCV24645072	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss319612289	CHEV_1_4761132	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32729159					SNP	A	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:4841274 () rs orientation: forward

Symbol	Name	Function Class
Gm6123	predicted gene 6123	80 bp upstream
Rr407423	regulatory region 407423	721 bp distal
Rr407424	regulatory region 407424	975 bp distal
Tssr5799	transcription start site region 5799	43 bp upstream