rs32729790 SNP Detail

Summary

• ID
  rs32729790
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:67168714 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAG ACCAGGCTGC ACAAACTTAA
  Y
  ATATATACAG AGGGCTTAGG TCAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45187091	mCV24325973	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss144536932	ENSMUSSNP5822999	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C		T
ss319761654	CHEV_1_67176129	CHEVERUD	SCREENING_POP	f	SNP				C		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32729790					SNP	C	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:67168714 () rs orientation: forward

Symbol	Name	Function Class
Cps1	carbamoyl-phosphate synthetase 1	within coordinates
Tssr7186	transcription start site region 7186	622 bp downstream
Tssr7187	transcription start site region 7187	507 bp downstream
Tssr7188	transcription start site region 7188	403 bp downstream