rs32730270 SNP Detail

Summary

• ID
  rs32730270
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:72886826 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGGCGCAG CTGTTAACAC
  TGGTACCCAG TTCTGTACCT GGTGTGGAAG AGCTGACTCC TTCCTCCCTT AGCTGAACAC
  CATCTGGTTT CTAACAACTT AGACAAGGTA GTATACCTTA CCTTTTGCAG TCACTGCTGG
  CTCTTTCCAA CTTGTAGTAT TGCCTAGGAG GGGGACCCGT GGTGCCCTCT ATACTGTATG
  K
  ACTCCTCTGT ACTGAGGGGT CCATTGGGAA CTATGTGCCT TGAATCGTAT CTATTAAGAA
  CTATCCCATT TGGGGACAGG GACTGCAAAA TGTGTTGAAA AAACCTCTAT GCACTCACCC
  AGATTTTTTT TTGGTTTGTT TTTGGGACCA GATTTTGCTG GGTAACCATG GCTGTCCTGG
  AATTCACTCT TTAGACCAGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45186702	mCV23053074	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G	G
ss144663554	ENSMUSSNP6042155	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs32730270					SNP	G	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:72886826 () rs orientation: forward

Symbol	Name	Function Class
Igfbp2	insulin-like growth factor binding protein 2	within coordinates
Tssr7321	transcription start site region 7321	1412 bp upstream
Tssr7322	transcription start site region 7322	1441 bp upstream
Tssr7323	transcription start site region 7323	1484 bp upstream
Tssr7324	transcription start site region 7324	1533 bp upstream
Tssr7325	transcription start site region 7325	1548 bp upstream
Tssr7326	transcription start site region 7326	1578 bp upstream
Tssr7327	transcription start site region 7327	1607 bp upstream
Tssr7328	transcription start site region 7328	1910 bp upstream
Tssr7329	transcription start site region 7329	1945 bp upstream
Tssr7330	transcription start site region 7330	1959 bp upstream
Tssr12178	transcription start site region 12178	1448 bp downstream
Tssr12179	transcription start site region 12179	1491 bp downstream
Tssr12180	transcription start site region 12180	1555 bp downstream
Tssr12181	transcription start site region 12181	1576 bp downstream
Tssr12182	transcription start site region 12182	1619 bp downstream
Tssr12183	transcription start site region 12183	1640 bp downstream