rs32730579 SNP Detail

Summary

• ID
  rs32730579
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185415055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTCAGATC TGAGTGATCA
  TTAAGCCTGA ATACTCTAAG CAACAAGACT CAGGTGATTG TAAGCCTCTG GCTGTTCTTT
  ATAACTAGAC TTCTGAGTTC AAAAAAATAT GTCTGTTAGC ATATTCAAGG AACTCCCAGG
  CTGGGGAGAT GATGTAGTTC AAACTTGTGC AGTCCCAGCG TTGTTCCTTC CTGGGAAGTA
  S
  AGACAGGAGG ATCGCTGATG CTCAAAGGCC AGCTTGCCTG GGGAGGCTCT GTCCCAGATG
  CTTAGAACAT AAGAATCAAC ACCAGCTTGG TTGTCCTCTG ACCTTCCCTT TTGTGATGGG
  CACACATGTG CTCACATTCA CACGGGTGAA TGAACATGCA TAGTCGTGCA TACACACACA
  CACACACACA CACACACACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	LG/J	SM/J
ss45186435	mCV23607336	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss146439995	ENSMUSSNP7045324	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C
ss320178602	CHEV_1_187506737	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	LG/J	SM/J
rs32730579					SNP	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185415055 () rs orientation: forward

Symbol	Name	Function Class
Rr425420	regulatory region 425420	298 bp distal
Rr425421	regulatory region 425421	750 bp distal
Rr425422	regulatory region 425422	1940 bp proximal