rs32730952 SNP Detail

Summary

• ID
  rs32730952
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180695926 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAATCTGCCC CATTGTCCCT TGACTCCCAT GACTGTCCAG
  TTTCTATGAT GTAACCACGC TGCTAAGCAT CTCCGAGGCA AAGTTGCCTG GTAGAGGGGT
  Y
  TAGAAGCCTC AGGATCCCCA CTGTGTGAGC ACAGTTCCCA GAGCGGAGCT CCGGGGGAGG
  AGCAGGCTAG ACAGTTGTGC TTCCCAACCG GAAAGAGAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46721078	NES10664369	PERLEGEN	MM_PANEL2	f	SNP	C		C	T	C	C	C	C	T	C	C	C	C	C	C
ss146386938	ENSMUSSNP2558923	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C						T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32730952					SNP	C	C	C	T	C	C	C	C	T	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46721078	NES10664369	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180695926 () rs orientation: forward

Symbol	Name	Function Class
Gm71256	predicted gene, 71256	2 bp upstream
Rr424611	regulatory region 424611	1971 bp proximal
Sde2	SDE2 telomere maintenance homolog (S. pombe)	248 bp downstream