rs32731685 SNP Detail

Summary

• ID
  rs32731685
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180696023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTCTAGAAG CCTCAGGATC CCCACTGTGT GAGCACAGTT
  CCCAGAGCGG AGCTCCGGGG GAGGAGCAGG CTAGACAGTT GTGCTTCCCA ACCGGAAAGA
  S
  ACGAATTTCT GTTGTTTGGG GAGGATCATT TTTCTATAGC ATGTGTGGCT GAACCCTCCT
  TTCATACTGT ACTGGCTGGG TTTGTGTCAC CTTAACACA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46721081	NES10664374	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G
ss146386942	ENSMUSSNP4617116	ENSEMBL	ENSEMBL_Sanger	f	SNP							C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32731685					SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46721081	NES10664374	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180696023 () rs orientation: forward

Symbol	Name	Function Class
Gm71256	predicted gene, 71256	within coordinates
Rr424611	regulatory region 424611	1874 bp proximal
Sde2	SDE2 telomere maintenance homolog (S. pombe)	345 bp downstream