rs32731854 SNP Detail

Summary

• ID
  rs32731854
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:20986804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTGGAGA GGAAAAAGAA
  TTTAATCCCA TGTAACACAG TATTTATCTC TAAGAAATCA CAGCCTCATG TGGGTGTAGA
  AGAAACACCC AGATAAGTAC AGAACAAGAC TGTGTCTGAA TGGGACATCA AACTAAAAGA
  AATGCAGGCT ATTTGCTGAG GCTCGAGGTG TTGCTTTGGC TTCATGCTTT GGAGAACATG
  K
  CGAGCTAGCG TCAGAGAGGT GCCTTCAGAG ATGGATAAAA TTCACAAATA TGGAGAAAGT
  CACACCCAGT AAAGAGATTG GCTTAGACGA AGACCCCAAA AAGGAAGCCC CAGTTGAGCA
  TCTACTTAAA AGATGTGACC ACTCAGATTT GTTTGTCAAA ATAAAAATCT AGAAACAAAC
  CGTTTATTCA CAAGACGGTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45186818	mCV24135302	ABI	CRAMUS_MOUSE	f	SNP	T	T		G
ss148726344	ENSMUSSNP4894033	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32731854					SNP	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:20986804 () rs orientation: forward

Symbol	Name	Function Class
Gm24171	predicted gene, 24171	1040 bp upstream
Paqr8	progestin and adipoQ receptor family member VIII	within coordinates
Tssr6058	transcription start site region 6058	1260 bp upstream
Tssr6059	transcription start site region 6059	1276 bp upstream