rs32732249 SNP Detail

Summary

• ID
  rs32732249
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:190804533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAAGTGCTCA CCACTGAGTG GGCTTTTTAT TTGTTTTTGT TTTTTGAGGC AGGGCCCATT
  ATGTAGCCCA GGGTATTCTT GAGCTCACAA TCCTCCTGCC TCCACCTCCT GAGTGCTAAG
  ATTATAGATA TGAACCACCA AGTCTTACTC AGTAGCTACT CTTTTGTACT TGATTAATTT
  GATTTATAAA TCAAAATTTC AAAATTCTGA AAGAATTATT GTTTGAATTT CAGGCCTTCC
  TCTGGGTTGA CTTCTTTTTT TTTTGTTTTG TTTTGTTTTT TCAAGACAGG GTTTCTCTGT
  R
  TCCTGGCTGT CCTAGAACTC ACTTTGTAGA CCAGGCTGGC CTCGAACTCA GAAATCTGCC
  TGCCTCTGCC TCCCAAGTGC TGGGATCAAA GGCGTGCGCC ACTGCTACCG CCACCACCAC
  CACCACCACC TGGCCTGGGT TGACTTCTGT GGGCACACCT TAGCTGAGGG CTGTGACAGG
  CAGCATGTGA CAGGCACCTT AGCTGAGGGC TTGTTCTGTC TTTGCTCCTG TGAAGGCTCC
  TTCGTAGCAG ACTGGTTGTC AGTGGGGAAA ATGATGATTC GGGAGCTGAG GCATGTCGGC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45187028	mCV23579827	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32732249					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:190804533 () rs orientation: forward

Symbol	Name	Function Class
Nsl1	NSL1, MIS12 kinetochore complex component	Intron
Rr426040	regulatory region 426040	176 bp distal
Rr426041	regulatory region 426041	32 bp proximal