rs32733188 SNP Detail

Summary

• ID
  rs32733188
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:72900325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTGG AAGGCTGAAA TGGGGTGACC
  Y
  GGGCTATGCA CTTGATGCAC CCTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45186569	mCV23053109	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss144663674	ENSMUSSNP4646943	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32733188					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:72900325 () rs orientation: forward

Symbol	Name	Function Class
Cpgi362	CpG island 362	1199 bp proximal
Igfbp5	insulin-like growth factor binding protein 5	within coordinates
Rr34508	regulatory region 34508	1126 bp distal
Rr34509	regulatory region 34509	676 bp proximal
Tssr7342	transcription start site region 7342	1198 bp upstream
Tssr12189	transcription start site region 12189	1353 bp upstream
Tssr12190	transcription start site region 12190	857 bp upstream
Tssr12191	transcription start site region 12191	127 bp upstream
Tssr12192	transcription start site region 12192	330 bp downstream
Tssr12193	transcription start site region 12193	495 bp downstream
Tssr12194	transcription start site region 12194	675 bp downstream
Tssr12195	transcription start site region 12195	1035 bp downstream
Tssr12196	transcription start site region 12196	1129 bp downstream
Tssr12197	transcription start site region 12197	1147 bp downstream
Tssr12198	transcription start site region 12198	1163 bp downstream