rs32734575 SNP Detail

Summary

• ID
  rs32734575
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:76366553 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACAGCTGAA TTCATGAAAC TGACCAGCTT GTCAATTTCA
  CACTTTGAAA GTACAATAAT AGCTGATAAC ATGCGGGTGA ATTTAAAAAA ATCTGTCACA
  R
  AATTGCTAGC TCCATTGAAA AGGACAGTAC AGTACATAAT TATGGGAGGC AGGAGGTAGG
  GAAAATTTTA TTGTCCATTT AGGAGATCTG TTTCAAGAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45686826	mCV24416344	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss146590081	ENSMUSSNP103926	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32734575					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:76366553 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14391	CpG island 14391	1012 bp proximal
Ptprd	protein tyrosine phosphatase receptor type D	within coordinates
Rr90206	regulatory region 90206	553 bp distal
Rr101140	regulatory region 101140	within coordinates
Tssr42162	transcription start site region 42162	1452 bp downstream