rs32736662 SNP Detail

Summary

• ID
  rs32736662
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165468827 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAAGTATCG GCTTTAGTAT GTCAAAGGAT TCCTCCATGC
  CCATGAAATT TGGAGTTTGG AATTTACCAA AAACCTGAAC AGCTTTACGG ACAGGTGGGG
  R
  TTTGAAGAGG AGTGCTTTAA AATATGTCAT GCCAAGGAAT GGACGATTTC ATCGAACCCG
  CCAAGTGTGA AATAGTGCAA CATTGAAAAC CCAGTAACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45187707	mCV23519522	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	G
ss146003990	ENSMUSSNP3732897	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32736662					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165468827 () rs orientation: forward

Symbol	Name	Function Class
Cpgi953	CpG island 953	564 bp proximal
n-TPagg2	nuclear encoded tRNA proline 2 (anticodon AGG)	376 bp upstream
n-TPcgg2	nuclear encoded tRNA proline 2 (anticodon CGG)	1013 bp downstream
Rr396497	regulatory region 396497	120 bp upstream
Rr396498	regulatory region 396498	825 bp upstream