rs32739758 SNP Detail

Summary

• ID
  rs32739758
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:156737253 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCTGGGTA CGATGAGCCA
  CACCTGTTAC CTGGACCCTA GGAGGCAAAG GTCAGAGATC ACAAGCCCAA GAGCAGCCTA
  AGCTACACAG AAAGTTCTAG GTTAGCCTGG GCTACACAGT GAGACCCAAT CTTAAACAAG
  TAAGTATTTT TAAACCCAGC TTTAAGCTGG GCGTGGTGGC GCACGCCTTT AATCCCAGCA
  Y
  TCGGTAGGCG GAGGCAGGTG GATTTCTGAG TTCGAGGCCA GCCTGGTCTA CAAAGTGAGT
  TCCAGGACAG CCAGGGCTAC ACAGAAAAAC CCTGTCTCGA AAAACCAAAA AAACAAAACA
  AACAAACAAA AAAAAAACCC AGCTTTATAA TGCATTATGC ATTAATACAA TTCAATCTTG
  TTTCCTTTAC CTGCTTTCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45187645	mCV23083191	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss145809026	ENSMUSSNP3031080	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32739758					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156737253 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ralgps2	Ral GEF with PH domain and SH3 binding motif 2			Intron
				Noncoding-Transcript-Variant
Rr396428	regulatory region 396428			1354 bp upstream
Rr421275	regulatory region 421275			383 bp proximal
Rr421276	regulatory region 421276			1324 bp proximal