rs32740529 SNP Detail

Summary

• ID
  rs32740529
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117913459 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAC AGAAGCTCAA TGAAAGCAGC
  Y
  GCGGCAGCTG CTCATTCACG GTTAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45687883	mCV24294398	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss147298689	ENSMUSSNP5177298	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss321281391	CHEV_4_117728867	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32740529					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117913459 () rs orientation: forward

Symbol	Name	Function Class
Gm70335	predicted gene, 70335	1276 bp upstream
Rr598294	regulatory region 598294	1221 bp distal
Rr598295	regulatory region 598295	944 bp proximal
Rr598296	regulatory region 598296	1647 bp proximal
St3gal3	ST3 beta-galactoside alpha-2,3-sialyltransferase 3	within coordinates
Tssr43029	transcription start site region 43029	1507 bp upstream