rs32746335 SNP Detail

Summary

• ID
  rs32746335
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191197282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTGCAAGT TGCCTCGAGG
  GAACTGCTCT GCTTGGTTCA TCAAATGGAA TTCATCAAAT GCTTCCATGT TCCTCTCTTG
  TAGCCTCCAG GCCCCATTTT GTTAGTGATT GATGCTCACG ATTCCCTTTC GATACTGATA
  ACTTCCACAG CCCCTTCAAG CTAGGAAAGT ATTTGGAAAG TATTTGAGTC TCCCTTTCAA
  R
  CCGATGTGAC TTGAAGAAGA ATTTGTAGCC GCTTGCTTTC CAGGACTCCC GACTCTCAGT
  AAGATAAAGA AGACCCAGGA AGGTTTTCAT CTGTTGAACC TTATGTTTCT TCAGCTTAAA
  GCAATCTTTC TGTTAATTCT GGGATTCCAT GTGGCTTCCT ATGACATAAA TTCACGGTTA
  AAAAAATAAA TAAACAGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45188270	mCV23929919	ABI	CRAMUS_MOUSE	f	SNP		G	G					G		A
ss49546295	NES12906281	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G		G	A	A		G		A	A	A		G
ss146506668	ENSMUSSNP4099074	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G							A				G
ss320195431	CHEV_1_193288964	CHEVERUD	SCREENING_POP	f	SNP												A						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32746335					SNP	A	G	G	G	G	G	G	G	G	A	A	A	G	G	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49546295	NES12906281	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191197282 () rs orientation: forward

Symbol	Name	Function Class
Gm32200	predicted gene, 32200	37 bp upstream
Tssr15794	transcription start site region 15794	238 bp downstream