rs32747082 SNP Detail

Summary

• ID
  rs32747082
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149760530 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCGC TTGAGGTGGC GGTGCGCGAG
  S
  GAGCATCGGC GGAGGGGCGC GGCTC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45690299	mCV24219637	ABI	CRAMUS_MOUSE	f	SNP	G	C	C
ss148037741	ENSMUSSNP463544	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		C		C
ss321426416	CHEV_4_149050182	CHEVERUD	SCREENING_POP	f	SNP				C		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32747082					SNP	G	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149760530 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15330	CpG island 15330	within coordinates
Pik3cd	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta	within coordinates
Rr605004	regulatory region 605004	40 bp distal
Rr605005	regulatory region 605005	within coordinates
Tssr44666	transcription start site region 44666	8 bp upstream
Tssr44667	transcription start site region 44667	within coordinates