rs32747652 SNP Detail

Summary

• ID
  rs32747652
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50621206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATAATATC TATTTTCTAA
  GGGTATGATG GCCAAATCAA TTCACACAAG ATAGAAAGCA TTCCATCCTA GCAGCCGTGG
  TTACTACTGC CTCGTGAATA CAAGAAAGTA TTCACAGATA GGCTGCCTGT GGAAAGCAGC
  TCCCTCCACA CCACAGACCT CTGGGGACAC TAAGCAACAT CAACTGACCA ATAATAAATG
  Y
  TGGAGAACTT ATTCTGTGCA TCCGACTAGG GTTCGTGGAA CCAAAAAAGC AAAATACAGT
  GTAACAACCT CTTTAAAAGC TCAGTCTAAA TCATGGCTAA TTGCTAGTCA GGGGAGAGAA
  ATCATAGCAA GCTATGGACA AACATCATGG GCATAATGCT ATAAGAAGAA CAGCCCCAAA
  AGTGAAGAGC AAACCCCTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47707832	NES11324186	PERLEGEN	MM_PANEL2	f	SNP	C		T	T	T	T	T	C	T	T	T	C		T	T	T	T
ss136479859	ENSMUSSNP596358	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T						T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32747652					SNP	C	C	T	T	T	T	T	C	T	T	T	C	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47707832	NES11324186	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50621206 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates