rs32748198 SNP Detail

Summary

• ID
  rs32748198
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165467373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGTCAAGCC TCGCAGACGT GCCCACAAGC CAATCTGATG
  GAGGCAATTC CTCAACTGAG GTTCCCTCTT TTTAGGTGAC TCTGGTTTCT GTCAAATTGA
  Y
  GAGCGCAAAC CAGCACGGAC GCATCACATT CCTTCTACCA AGACAGGAAG CTTTTCCACC
  AGAAGGCATC CGCTACTATG AATCTTTCTA TCATCAGTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45188989	mCV23519238	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss146003965	ENSMUSSNP3970732	ENSEMBL	ENSEMBL_Sanger	f	SNP			C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32748198					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165467373 () rs orientation: forward

Symbol	Name	Function Class
n-TPagg2	nuclear encoded tRNA proline 2 (anticodon AGG)	1830 bp upstream
Rr396497	regulatory region 396497	1574 bp upstream