rs32748224 SNP Detail

Summary

• ID
  rs32748224
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:50673048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAAAAAAA AAAAACCCAC
  ACAACTTAGT TAAAAAAAAA AAAGACATGA AATTTAGTCA TACTCGACAT CATAAACACT
  ACAAATTCCA TAAACTAACT AGGGCTGGGG AGATGACAGC AGCTCTTTCA CATCCTGTTT
  AAGGAGAAGT TACAGGCACA GATGCTTCTG GCAATAGTCC TCATACATTA GACAGGAAAG
  R
  GGAAATGATG CCTGTTATGT TTTATGAAAA AGAGCCATGT TTGATAGAGC AGGTATGGTG
  AGGTGGAAGG GTGTGCCTTT GCGGGCCCAT GCTGAGACAT CCTTCCCCAC TAAGGTACCA
  GCCACACAAC GGATATAGTA TGGAATAGAG TTACAGGGGT GGGGGGGAAC AGGGAAAGAA
  AGACAGAGGG TAAGAAAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47708424	NES11321083	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G	A	G	G	G	A	G	G	G
ss136481029	ENSMUSSNP947785	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32748224					SNP	A	A	G	G	G	G	G	A	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47708424	NES11321083	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50673048 () rs orientation: forward

Symbol	Name	Function Class
Cfap68	cilia and flagella associated protein 68	mRNA-UTR
Gm67659	predicted gene, 67659	within coordinates
Rr678731	regulatory region 678731	1691 bp proximal
Rr678732	regulatory region 678732	1780 bp proximal