rs32748404 SNP Detail

Summary

• ID
  rs32748404
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50621344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCCCTCCA CACCACAGAC
  CTCTGGGGAC ACTAAGCAAC ATCAACTGAC CAATAATAAA TGTTGGAGAA CTTATTCTGT
  GCATCCGACT AGGGTTCGTG GAACCAAAAA AGCAAAATAC AGTGTAACAA CCTCTTTAAA
  AGCTCAGTCT AAATCATGGC TAATTGCTAG TCAGGGGAGA GAAATCATAG CAAGCTATGG
  R
  CAAACATCAT GGGCATAATG CTATAAGAAG AACAGCCCCA AAAGTGAAGA GCAAACCCCT
  TCAACACTTG GGTCTGAATG TCATGGAGGC CAGTCCTTTT GCTGGTGACA TTTTCTCTTT
  TGGCCTGAAT GCTACTCCCT GTTGTTTCTT CTCCCGCCAC CCCCATGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47707834	NES11324187	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	A	G	A	A	A	G		A	A	A	A
ss136479862	ENSMUSSNP1895948	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32748404					SNP	G	G	A	A	A	A	A	G	A	A	A	G	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47707834	NES11324187	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50621344 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates