rs32749788 SNP Detail

Summary

• ID
  rs32749788
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137639993 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TAAAGTATGT TTTAACTAAC CTGACTTTTG ATCTGCTCCA AAGCTCTGTG ATTTTATTTT
  GCTTTTGCTA TACTGGGGAT GAAACTGAGG GAGTGTGCCA CCACTGAGCT ATATCTCCCA
  GCACAGCCCA AAGCAACGAT TCCCACCCCA CCCCCACTTT GTTTTTAAGA TTTTACTATG
  TAGACCAGAC TGGCCTTGAA CTCAGAGGTC TGCGCGCCTC TGTCTCCCCC GGGTACTGAG
  ATTTAATGGA ATGCACCACC ATACCCTCTT CCTCCTTTTT CTTTTCTTTT TCTTTCTTTC
  W
  TTTTTTTTTT TTTTTAATTT TTTGAGACAG GGTTTCTCTG TGTTCCCTGG CTGTCCTGGA
  ACTCACTCTG TAGACCAGGC TGGCCTCGAA CTCAGAAATT CGCCTGTCTC TGCCTCCCAA
  GTGCTGGGAT TAAAGGCGTG TGCCATCATG CCCGGCTCCC CTTTTTGCTA GAACTTAGAT
  CATTATTTGT GTGTGTGTGT GTGTGTACAT GTCTGGAAGT GTATGTGCAG TGACACGTGT
  AGAGGGCAAA GGTCAACCCG TGGGACTTGG CTCTCTCCTT GCATCCTGTG GATCCTGACG
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45689445	mCV25136976	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs32749788					SNP	T	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137639993 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15141	CpG island 15141	613 bp proximal
Ece1	endothelin converting enzyme 1	within coordinates
Tssr39791	transcription start site region 39791	805 bp upstream
Tssr39792	transcription start site region 39792	865 bp upstream
Tssr39793	transcription start site region 39793	1015 bp upstream