rs32749857 SNP Detail

Summary

• ID
  rs32749857
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:73074342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCTT AGCACTGCAT ATAAAGTTTG
  R
  CATGGTGGCC TGAGCCTGTC ATCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss46186568	mCV23344043	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss322708339	CHEV_8_74844397	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs32749857					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:73074342 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20584	CpG island 20584	within coordinates
Klf2	Kruppel-like transcription factor 2 (lung)	within coordinates
Rr382266	regulatory region 382266	1398 bp upstream
Rr400967	regulatory region 400967	1371 bp downstream
Rr665302	regulatory region 665302	1455 bp distal
Tssr2606	transcription start site region 2606	1590 bp upstream
Tssr77968	transcription start site region 77968	1606 bp downstream
Tssr77969	transcription start site region 77969	1583 bp downstream
Tssr77970	transcription start site region 77970	1427 bp downstream
Tssr77971	transcription start site region 77971	927 bp downstream
Tssr77972	transcription start site region 77972	891 bp downstream
Tssr77973	transcription start site region 77973	864 bp downstream
Tssr77974	transcription start site region 77974	799 bp downstream
Tssr77975	transcription start site region 77975	621 bp downstream
Tssr77976	transcription start site region 77976	397 bp downstream