rs32751023 SNP Detail

Summary

• ID
  rs32751023
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:108693822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGA GTGCTAGGAT TAAAGGTGTG
  Y
  GCCACCATGC CTGGCAAAGC TTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45689366	mCV23912955	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss147191152	ENSMUSSNP6158231	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss321252877	CHEV_4_108509230	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32751023					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:108693822 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14565	CpG island 14565	1485 bp distal
Rr376990	regulatory region 376990	1558 bp downstream
Rr597227	regulatory region 597227	1344 bp proximal
Tssr38314	transcription start site region 38314	1920 bp downstream
Tssr38315	transcription start site region 38315	1874 bp downstream
Tssr38316	transcription start site region 38316	1818 bp downstream
Txndc12	thioredoxin domain containing 12 (endoplasmic reticulum)	within coordinates