rs32753480 SNP Detail

Summary

• ID
  rs32753480
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50618977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAACCAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
  AAAGTGCTGA TTGGCTGTAG CTAAGACATT TGAACGACAC TGGTGAACAG GAGGCCATGG
  Y
  CATGTCTAAA ACTCAGGGAA GAGCGAAAGG CTAGACACAA AACTGGGGAG AGAACGTGAG
  GTTTTCTCGT ATTTTATGTG TATGCGTGTG TACATGAGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47707810	NES11324357	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	T	C	T	T		C	C	C	T		T
ss136479781	ENSMUSSNP2529303	ENSEMBL	ENSEMBL_Sanger	f	SNP	C					C
ss322959760	CHEV_9_50515782	CHEVERUD	SCREENING_POP	f	SNP									C					T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32753480					SNP	?	T	T	C	T	C	T	T	C	C	C	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47707810	NES11324357	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50618977 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates
Gm51674	predicted gene, 51674	1007 bp downstream