rs32754178 SNP Detail

Summary

• ID
  rs32754178
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50619963 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCAAAGGC CCTCACCACT
  CCTCCCCCTC ACGCAGGACT TCTCTTCACT CTGTGAGCCA GAGTAAACCC TTCTGTCTTT
  TAGCTGCTTC TGTCATGGAA ACGATGCAAG TTTACATCAA CACAGCATCT ATTAAAGAAG
  TGCAGGTAGA AGAGCTTTTG ATCTTAATCC TTTTGTGCCT ACATTTCCTG CCAGTCCTCA
  R
  GTAAATCCTC TCTAAGTAAA GGAAAGAGGG CAGATGCTTA AGATGGACTT TGGGATTCTT
  TTTTTTTTTT ACTTTATTTT CAGTTATGTG CGTGTGAGTG TGTGAGTGTG AGTGTGTGTG
  TGAGTGTGAG TGTGTGAGTG TGTGTGTGTG AGTGTGTGTG TGAGTGTGTG TGTGAGTGTG
  TGTGAGTGTG TGTGTGTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47707818	NES11324241	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G	G	G	G	G	A	G	G	G	G
ss136479811	ENSMUSSNP6777674	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32754178					SNP	G	A	G	G	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47707818	NES11324241	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50619963 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates
Gm51674	predicted gene, 51674	1993 bp downstream