rs32754181 SNP Detail

Summary

• ID
  rs32754181
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50620719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCCCAAAA TATGAATATT
  CTTATTATTT TATGTACATG GGTATATGTC TGTCCATGCA TGCTCAGTGC CCAGGGAGGC
  CAGAAGAGGG CATCCAAGTC CCAGGAACCA GAGGACCATG GGACTCAAAC CCTGGACCTC
  TGGAAGAAGA GCGAGAGATC TTCACTGCTG AGCCATCTCC AGCCTAAAAA TCTGATGTAT
  Y
  TTAAGTATTA TACTGTGGCA AAAAAAAAAA AAAAATTCCC GATTTGGGGG GCATTTGGAT
  TTCCCACAGT ACTTAGCTGG GTAAATGCTC AACTCATTTT TTTATTTCTA ACAATGCATA
  ATCTGAAGCA TTGGGTCCAA GAATTCTGAG TGAGGGACAC TCAGCCCGAA CTCAGACTCA
  CATCACAAAT AAATCACAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47707822	NES11324199	PERLEGEN	MM_PANEL2	f	SNP		T	T	T	T	T	T	T	C	T	T	T
ss136479832	ENSMUSSNP1048732	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T				T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32754181					SNP	C	T	T	T	T	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47707822	NES11324199	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50620719 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates