rs32754452 SNP Detail

Summary

• ID
  rs32754452
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:181056005 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTCCTTAA AACGCTGCAT
  TCTTGCTGGC AGCTGCTAAT AGCAACATAA AAAGGCCCTG TTGTTCCTAA CTGATGCACA
  AACGCTCTCA GGAATGAGGT TCCGCATGCC CGCTTCTTCC TGTCACTTGC AGCCAAGTCA
  TCGTGTCGGA AAGGCCGGTG TGAAGAAGGT ACCTGATTTT GATTCACACG AGTTCCCATC
  M
  TCCCTTGGGC CTTTATTTTG CCTAAGATCC ATGATTAATA AAGCCACGAG AAAACAAATA
  CTTTCCTTTG TTCTGCTTAT TGTATCTGCT ACAGTGAGAA GTCTCCATCT TAATACTTCT
  CTTTCCTTCC TATGTTGTTT GTGTAACAGG GAATCACTTC CTCCATCCAC TTCACTTGTG
  TGCAGGCTGA GCCATGTGCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46725034	NES10653768	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32754452					SNP	A	A	A	A	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46725034	NES10653768	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181056005 () rs orientation: forward

Symbol	Name	Function Class
A430110L20Rik	RIKEN cDNA A430110L20 gene	within coordinates
Gm38664	predicted gene, 38664	Intron
Gm57146	predicted gene, 57146	within coordinates
Rr424700	regulatory region 424700	1193 bp distal
Rr424701	regulatory region 424701	197 bp distal