rs32756337 SNP Detail

Summary

• ID
  rs32756337
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:45202318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTAATTTC ACATAGAAAT
  TCTTTGTGGG CCTCAGTAAT GTCTTTGAAT GATGAGAGGA GTGAGTCCTG AGAACACATG
  TTGGAGAAGT ATTTCTTTCA TTCCTCTTGC CTGACACAGC AGGGATTCAG CCGAGGTACC
  AGAGACACAG CAAGACAGAG TGCTAATTAC TATGGTGCCA GAAACCATCT AAGCTACTCC
  W
  TTGTGAGGTC TGGTATTTAA AGGTAAAACC AAGAGAGCAC ACACAGGAAC CATAACTCTA
  GAAACATATC AAAAGACACT TACTTGCAGT AGCTCTCATT GACCACAACA GATACCACCC
  CCAAGGAAGC AGAAAGGTTA ACTGACGATT TCGCATAGAG AAAAAAAAAA ATTCAAGTGT
  TATTCTTTAT TTCTATATTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss48208091	NES12149116	PERLEGEN	MM_PANEL2	f	SNP	A		A	T	T		A		T	A	T
ss148077449	ENSMUSSNP1371490	ENSEMBL	ENSEMBL_Sanger	f	SNP		T				T
ss325166159	CHEV_16_45382068	CHEVERUD	SCREENING_POP	f	SNP								T				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs32756337					SNP	A	T	A	T	T	T	A	T	T	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48208091	NES12149116	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:45202318 () rs orientation: forward

Symbol	Name	Function Class
Cd200	CD200 molecule	180 bp downstream
Tssr4884	transcription start site region 4884	735 bp downstream
Tssr4885	transcription start site region 4885	772 bp downstream
Tssr4886	transcription start site region 4886	1104 bp downstream
Tssr141220	transcription start site region 141220	644 bp downstream
Tssr141221	transcription start site region 141221	667 bp downstream
Tssr141222	transcription start site region 141222	788 bp downstream
Tssr141223	transcription start site region 141223	801 bp downstream
Tssr141224	transcription start site region 141224	820 bp downstream
Tssr141225	transcription start site region 141225	844 bp downstream
Tssr141226	transcription start site region 141226	896 bp downstream
Tssr141227	transcription start site region 141227	950 bp downstream
Tssr141228	transcription start site region 141228	992 bp downstream
Tssr141229	transcription start site region 141229	1008 bp downstream
Tssr141230	transcription start site region 141230	1161 bp downstream
Tssr141231	transcription start site region 141231	1255 bp downstream
Tssr141232	transcription start site region 141232	1307 bp downstream