rs32756341 SNP Detail

Summary

• ID
  rs32756341
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:45202943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATC TGTTTTCATA ATATATTATC
  R
  TTACACGAGA CAGGATTCAG AATGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
ss48208095	NES12149118	PERLEGEN	MM_PANEL2	f	SNP	G			G	A	A		A	G
ss148077460	ENSMUSSNP3451857	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G			G
ss325166164	CHEV_16_45382693	CHEVERUD	SCREENING_POP	f	SNP							G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
rs32756341					SNP	G	G	G	G	A	?	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48208095	NES12149118	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:45202943 () rs orientation: forward

Symbol	Name	Function Class
Cd200	CD200 molecule	within coordinates
Tssr4884	transcription start site region 4884	110 bp downstream
Tssr4885	transcription start site region 4885	147 bp downstream
Tssr4886	transcription start site region 4886	479 bp downstream
Tssr141220	transcription start site region 141220	19 bp downstream
Tssr141221	transcription start site region 141221	42 bp downstream
Tssr141222	transcription start site region 141222	163 bp downstream
Tssr141223	transcription start site region 141223	176 bp downstream
Tssr141224	transcription start site region 141224	195 bp downstream
Tssr141225	transcription start site region 141225	219 bp downstream
Tssr141226	transcription start site region 141226	271 bp downstream
Tssr141227	transcription start site region 141227	325 bp downstream
Tssr141228	transcription start site region 141228	367 bp downstream
Tssr141229	transcription start site region 141229	383 bp downstream
Tssr141230	transcription start site region 141230	536 bp downstream
Tssr141231	transcription start site region 141231	630 bp downstream
Tssr141232	transcription start site region 141232	682 bp downstream