rs32756895 SNP Detail

Summary

• ID
  rs32756895
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:45203696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAG TCAAATCCCT CACAGGCTCG
  Y
  GTCTGGTCTT TTGCTCTCCT TAGGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss48208099	NES12149120	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	T		T	C	T
ss325166167	CHEV_16_45383446	CHEVERUD	SCREENING_POP	f	SNP					C				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs32756895					SNP	C	C	T	T	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48208099	NES12149120	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:45203696 () rs orientation: forward

Symbol	Name	Function Class
Cd200	CD200 molecule	within coordinates
Tssr4884	transcription start site region 4884	640 bp upstream
Tssr4885	transcription start site region 4885	595 bp upstream
Tssr4886	transcription start site region 4886	265 bp upstream
Tssr141220	transcription start site region 141220	724 bp upstream
Tssr141221	transcription start site region 141221	700 bp upstream
Tssr141222	transcription start site region 141222	580 bp upstream
Tssr141223	transcription start site region 141223	566 bp upstream
Tssr141224	transcription start site region 141224	543 bp upstream
Tssr141225	transcription start site region 141225	487 bp upstream
Tssr141226	transcription start site region 141226	451 bp upstream
Tssr141227	transcription start site region 141227	416 bp upstream
Tssr141228	transcription start site region 141228	375 bp upstream
Tssr141229	transcription start site region 141229	359 bp upstream
Tssr141230	transcription start site region 141230	207 bp upstream
Tssr141231	transcription start site region 141231	106 bp upstream
Tssr141232	transcription start site region 141232	64 bp upstream