rs32756897 SNP Detail

Summary

• ID
  rs32756897
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:45203909 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTT AGCAACAGAA TTAAGAAACA
  Y
  GGAAATACAG AGATATCTTA GTGTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
ss48208103	NES12149122	PERLEGEN	MM_PANEL2	f	SNP	C		C	T		C		T	C
ss148077464	ENSMUSSNP3188193	ENSEMBL	ENSEMBL_Sanger	f	SNP		C			C
ss325166169	CHEV_16_45383659	CHEVERUD	SCREENING_POP	f	SNP							C			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
rs32756897					SNP	C	C	C	T	C	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48208103	NES12149122	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:45203909 () rs orientation: forward

Symbol	Name	Function Class
Cd200	CD200 molecule	within coordinates
Tssr4884	transcription start site region 4884	853 bp upstream
Tssr4885	transcription start site region 4885	808 bp upstream
Tssr4886	transcription start site region 4886	478 bp upstream
Tssr141220	transcription start site region 141220	937 bp upstream
Tssr141221	transcription start site region 141221	913 bp upstream
Tssr141222	transcription start site region 141222	793 bp upstream
Tssr141223	transcription start site region 141223	779 bp upstream
Tssr141224	transcription start site region 141224	756 bp upstream
Tssr141225	transcription start site region 141225	700 bp upstream
Tssr141226	transcription start site region 141226	664 bp upstream
Tssr141227	transcription start site region 141227	629 bp upstream
Tssr141228	transcription start site region 141228	588 bp upstream
Tssr141229	transcription start site region 141229	572 bp upstream
Tssr141230	transcription start site region 141230	420 bp upstream
Tssr141231	transcription start site region 141231	319 bp upstream
Tssr141232	transcription start site region 141232	277 bp upstream