rs32757625 SNP Detail

Summary

• ID
  rs32757625
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:41341577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTAA GGGGGGACAA GACAGGTAGG
  Y
  AGATACCATA AAGAATAACT GTGAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46187460	mCV24416951	ABI	CRAMUS_MOUSE	f	SNP		T			C		T
ss60601040	NES16305919	PERLEGEN	MM_PANEL2	f	SNP	T		T	T		T	T	T		C		T	T	C		T
ss144674435	ENSMUSSNP2455586	ENSEMBL	ENSEMBL_Sanger	f	SNP		T					T				C
ss322633459	CHEV_8_41973894	CHEVERUD	SCREENING_POP	f	SNP									T						T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32757625					SNP	T	T	T	T	C	T	T	T	T	C	C	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60601040	NES16305919	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:41341577 () rs orientation: forward

Symbol	Name	Function Class
Rr662620	regulatory region 662620	1149 bp distal
Slc7a2	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	within coordinates
Tssr76994	transcription start site region 76994	1894 bp downstream
Tssr76995	transcription start site region 76995	677 bp downstream
Tssr76996	transcription start site region 76996	621 bp downstream
Tssr76997	transcription start site region 76997	507 bp downstream
Tssr76998	transcription start site region 76998	128 bp downstream
Tssr76999	transcription start site region 76999	985 bp upstream
Tssr77000	transcription start site region 77000	1786 bp upstream
Tssr77001	transcription start site region 77001	1925 bp upstream
Tssr77002	transcription start site region 77002	1945 bp upstream
Tssr81068	transcription start site region 81068	1436 bp upstream