rs32757698 SNP Detail

Summary

• ID
  rs32757698
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:45217026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATCTTGAA ACTGCTTCCT
  CGAACTAAAA CAAGAAAGAT ATCATATTGG CTCCAGGTTA GACTACTCTG TTGCTACTTC
  CAGAAGTTGT AACGGGCTCT AGAGATAATA TATTGCACAT TTGCTGTCCA AAAGCAGAGG
  TAGTAATGAA TTCACTGCCG CATGGAGAAT GTGTCTCCTT CATCATTGTC TTCAATGTTC
  R
  TGATGGCAAG ACCCTAGAGA GAAGACAGTT CCAACCAAAC AACTTAGTGC AGTGATGTTA
  GCTCTCTAAA TTCTGCAATA ATAGTGACAG CAGGCACAAA AGGCTAAGAG TCTTCTAGTT
  CACCTGTTCA TGTTTATGAA TCAAAAATCC AAGTACCATA ACCACATACT CAATGCTCCT
  GGAAATTATA TTTCTGAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss48208215	NES12148935	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	A	G	G	G	A		G	A	A	G		G
ss325166241	CHEV_16_45396776	CHEVERUD	SCREENING_POP	f	SNP										G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32757698					SNP	A	G	G	G	A	G	G	G	A	G	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48208215	NES12148935	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:45217026 () rs orientation: forward

Symbol	Name	Function Class
Cd200	CD200 molecule	within coordinates
D16Mit84	DNA segment, Chr 16, Massachusetts Institute of Technology 84	1035 bp proximal
Rr327058	regulatory region 327058	976 bp proximal
Tssr141233	transcription start site region 141233	466 bp downstream