rs32758537 SNP Detail

Summary

• ID
  rs32758537
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74544645 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGGAAAGT AAAGAATGGT
  CAAGCGGGCG TGTGAATATC GCAGTCAAGG TTTTAATGGA TATGTGGCAA CAAAGTCACC
  TGTAAAGACA GCAGGCCTTG CAGGGAGGTA CGCTGAGACC ACCTGAACCT TGGTGAAGAG
  AGGCCAGATT TAGAATGCAG AAAGCAAGTG ACAACACGGA CGCGTTAAAG GAGAAGTAAA
  R
  GGGGCAACAC TCGAACGGGG CACCTGTAAG GCATTGGGTA TCCAAGGACC CGGGGCGGGC
  TAAGCAGCAG CCGGGAGAAC TCTGAAGTGG ACGCCGAGTG GGCGGACCGC AGGGGTGGGG
  TGGGGGTGCC GGGGAAAACG GCTCAATTCA GAAGCTGTCC CGGCTCGTCT TACCTGCGCT
  AGAGGGTCCC AGCTCCGGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45190810	mCV24840603	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss144687828	ENSMUSSNP3921448	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32758537					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74544645 () rs orientation: forward

Symbol	Name	Function Class
Cnot9	CCR4-NOT transcription complex, subunit 9	572 bp upstream
Cpgi385	CpG island 385	within coordinates
Rr396106	regulatory region 396106	289 bp upstream
Rr413210	regulatory region 413210	within coordinates
Rr413211	regulatory region 413211	307 bp proximal
Rr413212	regulatory region 413212	583 bp proximal
Rr413213	regulatory region 413213	1158 bp proximal
Tssr7425	transcription start site region 7425	537 bp upstream
Tssr7426	transcription start site region 7426	558 bp upstream
Tssr7427	transcription start site region 7427	625 bp upstream
Tssr7428	transcription start site region 7428	823 bp upstream
Tssr7429	transcription start site region 7429	892 bp upstream
Tssr7430	transcription start site region 7430	1216 bp upstream
Tssr12315	transcription start site region 12315	194 bp downstream
Tssr12316	transcription start site region 12316	301 bp downstream
Usp37	ubiquitin specific peptidase 37	within coordinates