rs32758578 SNP Detail

Summary

• ID
  rs32758578
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3647244 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACGAAGTT TCCAGGGATA
  AGGATGGTGC TCGATGAGGC TACAGAAGCA TGGGGGAAGC CCTGAGTTCT GTCCCTAGTC
  GGGCATGCCC TAAACTAGGC ACGGTGGTGC ATGCCTGTAA TCTTAGGCCT CTGGAGGTTA
  AAGTGGGAGG ATCCGAAATT CAAGGTCATT CTTAGCTACC AGGCAGTTTT GAGGCTACCT
  Y
  GGGATACATG AAACTCAACC TCTGAAATCT AGCCAAATAG ATGCAGAGGA GATGAGAAAC
  CTCAGTGGTA CAGGGGCTCG CTGGGAAAGC TGGAGGGCTT GAGTTCAGAA CCCCGGTATC
  TAGGGAAAAG GAGAACTGGA CAGACTGTAA CCTAAGCTCT GGAGAGGTAG AGATGCATGG
  ATCCCAGGGG GCTCATGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46187473	mCV22853527	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss148546633	ENSMUSSNP5951756	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32758578					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3647244 () rs orientation: forward

Symbol	Name	Function Class
Camsap3	calmodulin regulated spectrin-associated protein family, member 3	within coordinates
Rr180906	regulatory region 180906	1044 bp distal
Rr189485	regulatory region 189485	1157 bp proximal
Rr381636	regulatory region 381636	179 bp upstream
Tssr76064	transcription start site region 76064	720 bp downstream
Tssr76065	transcription start site region 76065	1071 bp upstream
Tssr76066	transcription start site region 76066	1095 bp upstream
Tssr76067	transcription start site region 76067	1110 bp upstream
Tssr76068	transcription start site region 76068	1127 bp upstream
Tssr76069	transcription start site region 76069	1199 bp upstream
Tssr76070	transcription start site region 76070	1349 bp upstream
Tssr76071	transcription start site region 76071	1398 bp upstream