rs32758884 SNP Detail

Summary

• ID
  rs32758884
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:121748719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAGAGGCT TTTTAAGTCA
  TCCTGTGGAC ACAGCCCGAG GAAGCGGCAT TGCCAGTGCC CCTAACTGGT TCTGCTCAGA
  GTCCTCGGTT TAGAGGTGAA GGGCTTGGTC CATTGAGTTC TCTCAGACAG TGGCCAAACA
  GTTCAGCACT GAAGGGCAAG ACCCAGCAGG GGCCTCCTTG ATGTCCAGCT TGGTGGGGTT
  R
  GCAGGAAAAC CTGAGTGCAC TTGACTCTAA TCCAATTCAG AATGCTTTCT GTTTGTCATT
  TGTCATTTTT TCATGTGTTA CCAACGAGTC CAAAATGGTT GCTTCTTCCT GTCTATTGGT
  CTAGTCAGCA TGATGTTGTC AATATAATGA ACCAATGTGA TATTTTGTGG AAGACACAGA
  GGATCAAGAT CCCTTCAAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47209824	NES11592129	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32758884					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47209824	NES11592129	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:121748719 () rs orientation: forward

Symbol	Name	Function Class
Dctn5	dynactin 5	452 bp downstream
Gm15489	predicted gene 15489	within coordinates
Rr153390	regulatory region 153390	1919 bp distal
Rr159748	regulatory region 159748	1882 bp proximal
Rr163514	regulatory region 163514	1270 bp proximal
Rr163515	regulatory region 163515	1485 bp proximal
Tssr68863	transcription start site region 68863	1200 bp downstream