ATGTAGGTGT GCTTATGTGT TTGAATGGAT AATATAGGTA TTTGAAACTG TACCTACGTA AGTGAAATCA AACTGTTTCT CTGTACGGCT TGGAAACTGC CCTTTATTTG GCAGTATACT ATTGCGATAA ATAGAGACCC ACATCACTCC TCTCGAGAGT TACAAACTTC ACATACTGCA TAGGTGAGTT TAACACAAAG Y AGTGAATCAG TCCCATAGTA CAATGGATCA TTAAACGGTG AACCTGGGCA CTATTAGAAA CTGCTGTCCT GACATTGTTT TACATGTATT GTGCAATTGG GCACAGTTAT CTCTGACATA CATTCTTAGA AGTTGATTTA TAAGTACAGG GGTATAAATG TTGAAAACTT TGCTAACTTT TTATTTTATG TGTCTGTGTC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss47209743 | NES11592306 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | C | T | C | C | C | C | C | C | T | T |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs32759763 | SNP | C | C | C | C | C | C | T | C | C | C | C | C | C | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss47209743 | NES11592306 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr7:121745822 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Dctn5 | dynactin 5 | within coordinates | ||||||
Gm15489 | predicted gene 15489 | 1689 bp downstream | ||||||
Rr153390 | regulatory region 153390 | 779 bp proximal | ||||||
Tssr68863 | transcription start site region 68863 | 1688 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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