rs32760502 SNP Detail

Summary

• ID
  rs32760502
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:121746219 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCTTGCC TGCATATATC
  TCTGCACTAC ATGCATGAAG CACCCAGACC TAGAGTTACA CATGGTTGTT AGCTGTCATG
  TGGATGTTGG TACTGAACCT AGGACCTCTG TAAGAACAGT TAGTGCTGCT CTTAACTGCC
  AAGGCATTTC TCCAGCCCTC TGCTACCTAT TTTTAAAGTG CATGAGTGGA GACAGCAGCT
  Y
  ACATACCTCT GTTTCAGAAA GTTTGTTGTT GTTACTGTTG TTGTTGCTGT TGTTGTTTTG
  GGACAGGTTT CCTGTGTATC CCTGGCTGTC CTGGAACTCA CTTTGTAGAC CAGGCTGGCC
  TCGAACTCAG AAATCCGCCT GCCTCTGCCT CCCGAGTCCT GGAATTATTT TATTTTATTT
  TATTTCATTT TATTGGTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47209752	NES11592278	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T	C	T	T	T	T		T	T	C	T
ss145833513	ENSMUSSNP3672020	ENSEMBL	ENSEMBL_Sanger	f	SNP		T											C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32760502					SNP	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47209752	NES11592278	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:121746219 () rs orientation: forward

Symbol	Name	Function Class
Dctn5	dynactin 5	within coordinates
Gm15489	predicted gene 15489	1292 bp downstream
Rr153390	regulatory region 153390	382 bp proximal
Tssr68863	transcription start site region 68863	1291 bp upstream