rs32760900 SNP Detail

Summary

• ID
  rs32760900
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180535445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCAGCTGACA GGTAGTTGTG AAGCCACCTG GAGAGGTGCC AGTAGAGAAT TAGCCATCAG
  CCACACCTAG GGGTGAGGGT GCCGGAGCCT GGAGGGGCCC TTATCAGGGA TGAAATCTGT
  CATTTCCCTG AGAAGGGGGC CTGAGTCCAA AGCTTGGGGG CCTTAAAAGT GGTCCTGAAT
  GAGCCCCACA TTCACCCGTG ATCTTCTGTT TTCAGGGATC AGAGTCTGAG CACAGCTTCT
  CCAAACTCAG AGGCATGGTG GGATCCTGGG ACTGTGTGTG TGTGTGTGTG TGTGTGTAAG
  W
  GAGACAGACA GACAGACAGA CAGACAGACA GACAGATAGA GAGACAGGCA GAAACAGAGA
  CAGAGTCAGA GAGTGACAAG GAAGCCCTGT GTGTGACCTT TCTACTTAGT TCTGAGTTTG
  GTTTTACTCA CCCCCTCCCC TTTGATAATT ATTAAACAAG CAACCACAGA GCTGGGCTAG
  GGAGATGACT CGTGGGTAAA GTTCTTGTAA TGTAATACTA ACCCCGACAA CCTGAGTTCG
  AGTCTATACC CCATGATCCC ATGTGCAAAG CTGGAGAGCA ATAACCCAGG CTCTCCTAGA
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45190549	mCV24577345	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs32760900					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180535445 () rs orientation: forward

Symbol	Name	Function Class
Rr424548	regulatory region 424548	44 bp proximal
Rr424549	regulatory region 424549	1116 bp proximal