rs32761026 SNP Detail

Summary

• ID
  rs32761026
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50799141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGCTCAGG GATCTGTGGT
  CACGTCTCTG TGCCTGGATT GTGGATAGGT GTGTCACTGA TGACAGCTCC ACGTTTGATG
  TGAAGTTCTA TCCACTCTGC TACATTCAAG ACCCATATTT ATTTCCTCTT TCTGGATTCT
  GCCCAAAAAT AATCTATGTA TCAAATTCAT TGCTCGAGAG CTGTTTAGCC TTTGAAATTC
  Y
  TGGCTGGAGC CAAAGTGGAA GAGCAGAGCC ATGCTTTACT GAGCCCAAGG TGGGACAACT
  GTGGTCTGTG AGATTTCCTA TGTGGCACAT AGCCCCAGAC ACAGCACAGT GCTTGCTCAG
  GCAAAACAGT TCATAACACT GGAACAATAC AGGGAGATTA GCATGGCCCC TACACAAGGA
  TGACATGCAA GTTCATGCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46317618	mCV25209779	ABI	CRAMUS_MOUSE	f	SNP	C	T					T
ss47709492	NES11314254	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	T	T	T		C	T	T	T	C	T	T	T	T
ss136483613	ENSMUSSNP552809	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32761026					SNP	C	T	T	T	T	T	T	C	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47709492	NES11314254	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50799141 () rs orientation: forward

Symbol	Name	Function Class
Gm25558	predicted gene, 25558	111 bp upstream
Ppp2r1b	protein phosphatase 2, regulatory subunit A, beta	within coordinates
Rr195477	regulatory region 195477	660 bp proximal
Rr209487	regulatory region 209487	within coordinates