rs32761049 SNP Detail

Summary

• ID
  rs32761049
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:48816356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGGAATAGT GCATGCACCT
  AGCTGCTGAG CCATCCAGCC CACATCCAGT AATGCTTCAT GTTGCTAAAA CGCCTTTCAA
  AAAGACCTTG GCATTACGTA CTAGCAGTGC ATTGATTTTG CCATCGCGCA ACCAGGCCCA
  TCCTTAGTTC TTAGTATTTA CCGTTTTTGA GGGTGATGTA GTTTCCGAGG ATACACAAAT
  R
  TTTATCATGA GAGACACGAT TAGTCATTCG TCTGCACTGC TGCTGCAGTG TGACTTTATA
  ACCCCACACA GTGTGACTGC AGTGTGACTT TATAACCCCA CACAGTGTGA CTGCAGTGTG
  ACTGCAGTGT GACTTTATAA CCCACACAGA ACCTGTGCTT GGAGTCATTT TGCTCATGTT
  GGTCTAGTCT GATATTCGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48208790	NES12148079	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32761049					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48208790	NES12148079	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:48816356 () rs orientation: forward

Symbol	Name	Function Class
Cip2a	cell proliferation regulating inhibitor of protein phosphatase 2A	within coordinates
Cpgi8305	CpG island 8305	1424 bp distal
Dzip3	DAZ interacting protein 3, zinc finger	1851 bp upstream
Rr391755	regulatory region 391755	1297 bp downstream
Rr516662	regulatory region 516662	1795 bp distal
Rr516663	regulatory region 516663	710 bp distal
Rr516664	regulatory region 516664	1532 bp distal
Tssr138707	transcription start site region 138707	1754 bp downstream
Tssr141319	transcription start site region 141319	1870 bp upstream